Publications

Microbase2.0 – A Generic Framework for Computationally Intensive Bioinformatics Workflows in the Cloud, Journal of Integrative Bioinformatics (JIB), 2012 (in press).

A Grid and Cloud-based framework for high throughput bioinformatics, PhD thesis, School of Computing Science, University of Newcastle upon Tyne, 2009, Keith Flanagan

Exploring Microbial Genome Sequences to Identify Protein Families on the Grid, IEEE Transactions on Information Technology in Biomedicine, vol. 11 (4), July 2007, Yudong Sun, Anil Wipat, Matthew Pocock, Peter A. Lee, Keith Flanagan, and James T. Worthington

e-Science tools for the genomic scale characterisation of bacterial secreted proteins, Proceedings of the UK e-Science All Hands Meeting 2006, pages 788-795. National e-Science Centre, 2006. Tracy Craddock, Phil Lord, Colin Harwood, and Anil Wipat

A Grid-based System for Microbial Genome Comparison and Analysis, the 5th IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2005), Cardiff, UK, May 9-12 2005. Yudong Sun, Anil Wipat, Matthew Pocock, Pete A. Lee, Paul Watson, Keith Flanagan and James T. Worthington

Developing Grid-based Systems for Microbial Genome Comparisons: The Microbase Project, UK e-Science All Hands Meeting 2004, Nottingham, August 31 – September 3, 2004. Anil Wipat, Yudong Sun, Matthew Pocock, Pete Lee, Paul Watson and Keith Flanagan